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Methods for delineating cellular regions and classifying regions of histopathology and microanatomy.
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2015. Nuclei segmentation via sparsity constrained convolutional regression. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
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2015. Predictive sparse morphometric context for classification of histology sections. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
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2015. Quantification of the Dynamics of DNA Repair to Ionizing Radiation via Colocalization of 53BP1 and γH2AX. Video Bioinformatics: From Live Imaging to Knowledge.
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2015. Stacked Predictive Sparse Decomposition for Classification of Histology Sections. International Journal of Computer Vision. 113:3–18.
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2015. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models. PLoS One. 11:e0148379.
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2016. Integrative Analysis of Cellular Morphometric Context Reveals Clinically Relevant Signatures in Lower Grade Glioma. Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2016 - 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part {I}.
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2016. Phenotypic Characterization of Breast Invasive Carcinoma via Transferable Tissue Morphometric Patterns learned from Glioblastoma Multiforme.. Proc IEEE Int Symp Biomed Imaging. 2016:1025-1028.
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2016. Machine Learning in Multimodal Medical Imaging.. Biomed Res Int. 2017:1278329.
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2017. High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia.. Cell Rep. 23(4):1205-1219.
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2018. Unsupervised Transfer Learning via Multi-Scale Convolutional Sparse Coding for Biomedical Applications.. IEEE Trans Pattern Anal Mach Intell. 40(5):1182-1194.
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2018. Genetic and metabolic links between the murine microbiome and memory.. Microbiome. 8(1):53.
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2020. Identification of a novel 15-gene expression signature predicting overall survival of human colorectal cancer.. Clin Transl Med. 10(8):e258.
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2020. Match Feature U-Net: Dynamic Receptive Field Networks for Biomedical Image Segmentation. Symmetry. 12:1230.
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2020. Systematic Analysis of Impact of Sampling Regions and Storage Methods on Fecal Gut Microbiome and Metabolome Profiles.. mSphere. 5(1)
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2020. Thirdhand smoke: Genotoxicity and carcinogenic potential.. Chronic Dis Transl Med. 6(1):27-34.
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2020. Contribution of trace element exposure to gestational diabetes mellitus through disturbing the gut microbiome.. Environ Int. 153:106520.
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2021. Development and Validation of an Unsupervised Feature Learning System for Leukocyte Characterization and Classification: A Multi-Hospital Study. 129(6):1837-1856.
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2021. Distinct Clinical Impact and Biological Function of Angiopoietin and Angiopoietin-like Proteins in Human Breast Cancer.. Cells. 10(10)
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2021. From Mouse to Human: Cellular Morphometric Subtype Learned From Mouse Mammary Tumors Provides Prognostic Value in Human Breast Cancer.. Front Oncol. 11:819565.
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