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Zhong C, Han J, Borowsky A, Parvin B, Wang Y, Chang H. 2016. When machine vision meets histology: A comparative evaluation of model architecture for classification of histology sections.. Med Image Anal. 35:530-543.

Zhong C, Han J, Borowsky A, Parvin B, Wang Y, Chang H. 2017. When machine vision meets histology: A comparative evaluation of model architecture for classification of histology sections.. Med Image Anal. 35:530-543.

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Chang H, Han J, Zhong C, Snijders AM, Mao J-H. 2018. Unsupervised Transfer Learning via Multi-Scale Convolutional Sparse Coding for Biomedical Applications.. IEEE Trans Pattern Anal Mach Intell. 40(5):1182-1194.

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Hang B, Wang P, Zhao Y, Chang H, Mao J-H, Snijders AM. 2020. Thirdhand smoke: Genotoxicity and carcinogenic potential.. Chronic Dis Transl Med. 6(1):27-34.

He L, Zhou Y-X, Zhang Y, Hang B, Chang H, Schick SF, Celniker SE, Xia Y, Snijders AM, Mao J-H. 2021. Thirdhand cigarette smoke leads to age-dependent and persistent alterations in the cecal microbiome of mice.. Microbiologyopen. 10(3):e1198.

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Liang Y, Dong T, Chen M, He L, Wang T, Liu X, Chang H, Mao J-H, Hang B, Snijders AM et al.. 2020. Systematic Analysis of Impact of Sampling Regions and Storage Methods on Fecal Gut Microbiome and Metabolome Profiles.. mSphere. 5(1)

Chang H, Auer M, Parvin B. 2009. Structural Annotation of EM Images by Graph Cut. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.

DeFilippis RAnna, Fordyce C, Patten K, Chang H, Zhao J, Fontenay GV, Kerlikowske K, Parvin B, Tlsty TD. 2014. Stress signaling from human mammary epithelial cells contributes to phenotypes of mammographic density. Cancer Res. 74:5032-44.

Cheng Q, Bilgin CCagatay, Fonteney G, Chang H, Henderson M, Han J, Parvin B. 2016. Stiffness of the microenvironment upregulates ERBB2 expression in 3D cultures of MCF10A within the range of mammographic density.. Sci Rep. 6:28987.

Chang H, Zhou Y, Borowsky A, Barner KE, Spellman PT, Parvin B. 2015. Stacked Predictive Sparse Decomposition for Classification of Histology Sections. International Journal of Computer Vision. 113:3–18.

Chang H, Zhou Y, Spellman PT, Parvin B. 2013. Stacked Predictive Sparse Coding for Classification of Distinct Regions in Tumor Histopathology. {IEEE} International Conference on Computer Vision, {ICCV} 2013, Sydney, Australia, December 1-8, 2013.

Chang H, Parvin B. 2006. Segmentation of Three Dimensional Cell Culture Models from a Single Focal Plane. Advances in Visual Computing, Second International Symposium, {ISVC} 2006 Lake Tahoe, NV, USA, November 6-8, 2006. Proceedings, Part {II}.

Han J, Chang H, Yang Q, Barcellos-Hoff MHelen, Parvin B. 2007. Segmentation of Mammosphere Structures from Volumetric Data. Proceedings of the 2007 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.

Chang H, Yang Q, Parvin B. 2007. Segmentation of heterogeneous blob objects through voting and level set formulation. Pattern Recognition Letters. 28:1781–1787.

Chang H, DeFilippis RAnna, Tlsty TD, Parvin B. 2008. Scoring histological sections through immunohistochemistry. Proceedings of the 2008 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, May 14-17, 2008.

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Nguyen DH, Oketch-Rabah HA, Illa-Bochaca I, Geyer FC, Reis-Filho JS, Mao J-H, Ravani SA, Zavadil J, Borowsky AD, D Jerry J et al.. 2011. Radiation acts on the microenvironment to affect breast carcinogenesis by distinct mechanisms that decrease cancer latency and affect tumor type.. Cancer Cell. 19:640-51.

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Chang H, Park C, Parvin B. 2007. Quantitative Representation of Three-dimensional Cell Culture Models. Proceedings of the 2007 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.

Groesser T, Fontenay GV, Han J, Chang H, Pluth J, Parvin B. 2015. Quantification of the Dynamics of DNA Repair to Ionizing Radiation via Colocalization of 53BP1 and Î³H2AX. Video Bioinformatics: From Live Imaging to Knowledge.

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Ding D, Yong H, You N, Lu W, Yang X, Ye X, Wang Y, Cai T, Zheng X, Chen H et al.. 2022. Prospective Study Reveals Host Microbial Determinants of Clinical Response to Fecal Microbiota Transplant Therapy in Type 2 Diabetes Patients.. Front Cell Infect Microbiol. 12:820367.

To MD, Quigley DA, Mao J-H, Del Rosario R, Hsu J, Hodgson G, Jacks T, Balmain A. 2011. Progressive genomic instability in the FVB/Kras(LA2) mouse model of lung cancer.. Mol Cancer Res. 9:1339-45.

Chang H, Spellman PT, Parvin B. 2015. Predictive sparse morphometric context for classification of histology sections. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.

Han J, Fontenay GV, Wang Y, Mao J-H, Chang H. 2016. Phenotypic Characterization of Breast Invasive Carcinoma via Transferable Tissue Morphometric Patterns learned from Glioblastoma Multiforme.. Proc IEEE Int Symp Biomed Imaging. 2016:1025-1028.

Groesser T, Chang H, Fontenay G, Chen J, Costes SV, Barcellos-Hoff MHelen, Parvin B, Rydberg B. 2011. Persistence of γ-H2AX and 53BP1 foci in proliferating and non-proliferating human mammary epithelial cells after exposure to γ-rays or iron ions. Int J Radiat Biol. 87:696-710.

Chang H, Andarawewa KL, Han J, Barcellos-Hoff MHelen, Parvin B. 2007. Perceptual Grouping of Membrane Signals in Cell-Based Assays. Proceedings of the 2007 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.

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Zhou Y, Chang H, Barner KE, Parvin B. 2015. Nuclei segmentation via sparsity constrained convolutional regression. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.

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