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Zhou Y, Chang H, Barner KE, Parvin B.  2015.  Nuclei segmentation via sparsity constrained convolutional regression. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
Zhou Y, Chang H, Barner KE, Spellman PT, Parvin B.  2014.  Classification of Histology Sections via Multispectral Convolutional Sparse Coding. 2014 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2014, Columbus, OH, USA, June 23-28, 2014.
Zhong C, Han J, Borowsky A, Parvin B, Wang Y, Chang H.  2016.  When machine vision meets histology: A comparative evaluation of model architecture for classification of histology sections.. Med Image Anal. 35:530-543.
Zhong C, Han J, Borowsky A, Parvin B, Wang Y, Chang H.  2017.  When machine vision meets histology: A comparative evaluation of model architecture for classification of histology sections.. Med Image Anal. 35:530-543.
Zhong C, He L, Lee S-Y, Chang H, Zhang Y, Threadgill DW, Yuan Y, Zhou F, Celniker SE, Xia Y et al..  2021.  Host genetics and gut microbiota cooperatively contribute to azoxymethane-induced acute toxicity in Collaborative Cross mice.. Arch Toxicol. 95(3):949-958.
Zhang Y, Chen T, Zhang Y, Hu Q, Wang X, Chang H, Mao J-H, Snijders AM, Xia Y.  2021.  Contribution of trace element exposure to gestational diabetes mellitus through disturbing the gut microbiome.. Environ Int. 153:106520.
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Yang H, Zhang M, Mao X-Y, Chang H, Perez-Losada J, Mao J-H.  2021.  Distinct Clinical Impact and Biological Function of Angiopoietin and Angiopoietin-like Proteins in Human Breast Cancer.. Cells. 10(10)
Yan H, Mao X, Yang X, Xia Y, Wang C, Wang J, Xia R, Xu X, Wang Z, Li Z et al..  2021.  Development and Validation of an Unsupervised Feature Learning System for Leukocyte Characterization and Classification: A Multi-Hospital Study. 129(6):1837-1856.
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Xia Y, Ji Z, Krylov A, Chang H, Cai W.  2017.  Machine Learning in Multimodal Medical Imaging.. Biomed Res Int. 2017:1278329.
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Wen Q, Chang H, Parvin B.  2009.  A Delaunay Triangulation Approach for Segmenting Clumps of Nuclei. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.
Wang Z, Liu Y, Zhang P, Zhang W, Wang W, Curr K, Wei G, Mao J-H.  2013.  FAM83D promotes cell proliferation and motility by downregulating tumor suppressor gene FBXW7.. Oncotarget. 4:2476-86.
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Vatter FAPelissie, Schapiro D, Chang H, Borowsky AD, Lee JK, Parvin B, Stampfer MR, LaBarge MA, Bodenmiller B, Lorens JB.  2018.  High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia.. Cell Rep. 23(4):1205-1219.
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To MD, Quigley DA, Mao J-H, Del Rosario R, Hsu J, Hodgson G, Jacks T, Balmain A.  2011.  Progressive genomic instability in the FVB/Kras(LA2) mouse model of lung cancer.. Mol Cancer Res. 9:1339-45.
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Srinivasa G, Fickus MC, Guo Y, Linstedt AD, Kovacević J.  2009.  Active mask segmentation of fluorescence microscope images.. IEEE Trans Image Process. 18:1817-29.
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Rejniak KA, Wang SE, Bryce NS, Chang H, Parvin B, Jourquin J, Estrada L, Gray JW, Arteaga CL, Weaver AM et al..  2010.  Linking changes in epithelial morphogenesis to cancer mutations using computational modeling. PLoS Comput Biol. 6
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Qin X, Wu C, Chang H, Lu H, Zhang X.  2020.  Match Feature U-Net: Dynamic Receptive Field Networks for Biomedical Image Segmentation. Symmetry. 12:1230.
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Parvin B., Chang H, Zhou Y..  2015.  Methods for delineating cellular regions and classifying regions of histopathology and microanatomy.
Parvin B, Chang H, Han J, Fontenay G.  2015.  Diagnostic and prognostic histopathology system using morphometric indices.
Parvin B, Yang Q, Han J, Chang H, Rydberg B, Barcellos-Hoff MHelen.  2007.  Iterative Voting for Inference of Structural Saliency and Characterization of Subcellular Events. {IEEE} Trans. Image Processing. 16:615–623.
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Nguyen DH, Oketch-Rabah HA, Illa-Bochaca I, Geyer FC, Reis-Filho JS, Mao J-H, Ravani SA, Zavadil J, Borowsky AD, D Jerry J et al..  2011.  Radiation acts on the microenvironment to affect breast carcinogenesis by distinct mechanisms that decrease cancer latency and affect tumor type.. Cancer Cell. 19:640-51.
Nayak N, Chang H, Borowsky A, Spellman PT, Parvin B.  2013.  Classification of tumor histopathology via sparse feature learning. {ISBI}.
Nath S, Spencer VA, Han J, Chang H, Zhang K, Fontenay GV, Anderson C, Hyman JM, Nilsen-Hamilton M, Chang Y-T et al..  2012.  Identification of fluorescent compounds with non-specific binding property via high throughput live cell microscopy. PLoS One. 7:e28802.
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Mao J-H, Kim Y-M, Zhou Y-X, Hu D, Zhong C, Chang H, Brislawn CJ, Fansler S, Langley S, Wang Y et al..  2020.  Genetic and metabolic links between the murine microbiome and memory.. Microbiome. 8(1):53.
Mao AW, Barck H, Young J, Paley A, Mao J-H, Chang H.  2022.  Identification of a novel cancer microbiome signature for predicting prognosis of human breast cancer patients.. Clin Transl Oncol. 24(3):597-604.
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Louie KB, Bowen BP, McAlhany S, Huang Y, Price JC, Mao J-H, Hellerstein M, Northen TR.  2013.  Mass spectrometry imaging for in situ kinetic histochemistry.. Sci Rep. 3:1656.

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