Publication
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2006. 3D Segmentation of Mammospheres for Localization Studies. Advances in Visual Computing, Second International Symposium, {ISVC} 2006, Lake Tahoe, NV, USA, November 6-8, 2006 Proceedings, Part {I}.
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2012. Automatic segmentation and quantification of filamentous structures in electron tomography. {ACM} International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB’ 12, Orlando, FL, {USA} - October 08 - 10, 2012.
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2012. Batch-invariant nuclear segmentation in whole mount histology sections. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
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2008. A Bayesian approach for image segmentation with shape priors. 2008 {IEEE} Computer Society Conference on Computer Vision and Pattern Recognition {(CVPR} 2008), 24-26 June 2008, Anchorage, Alaska, {USA}.
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2013. Characterization of Tissue Histopathology via Predictive Sparse Decomposition and Spatial Pyramid Matching. Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part {II}.
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2014. Classification of Histology Sections via Multispectral Convolutional Sparse Coding. 2014 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2014, Columbus, OH, USA, June 23-28, 2014.
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2013. Classification of Tumor Histology via Morphometric Context. 2013 {IEEE} Conference on Computer Vision and Pattern Recognition, Portland, OR, USA, June 23-28, 2013.
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2013. Classification of tumor histopathology via sparse feature learning. {ISBI}.
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2011. Comparison of sparse coding and kernel methods for histopathological classification of gliobastoma multiforme. Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}.
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2015. Coupled segmentation of nuclear and membrane-bound macromolecules through voting and multiphase level set. Pattern Recognition. 48:882–893.
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2009. A Delaunay Triangulation Approach for Segmenting Clumps of Nuclei. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.
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2012. Detection of 3D filamentous networks from tomographic electron microscopy. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
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2009. Graphical methods for quantifying macromolecules through bright field imaging. Bioinformatics. 25:1070–1075.
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2008. Integrated profiling of cell surface protein and nuclear marker for discriminant analysis. Proceedings of the 2008 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, May 14-17, 2008.
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2013. Integrated profiling of three dimensional cell culture models and 3D microscopy. Bioinformatics. 29:3087–3093.
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2016. Integrative Analysis of Cellular Morphometric Context Reveals Clinically Relevant Signatures in Lower Grade Glioma. Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2016 - 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part {I}.
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2013. Invariant Delineation of Nuclear Architecture in Glioblastoma Multiforme for Clinical and Molecular Association. {IEEE} Trans. Med. Imaging. 32:670–682.
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2007. Iterative Voting for Inference of Structural Saliency and Characterization of Subcellular Events. {IEEE} Trans. Image Processing. 16:615–623.
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2012. Learning invariant features of tumor signature with independent subspace analysis. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
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2007. Modeling of Front Evolution with Graph Cut Optimization. Proceedings of the International Conference on Image Processing, {ICIP} 2007, September 16-19, 2007, San Antonio, Texas, {USA}.
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2012. Molecular bases of morphometric composition in Glioblastoma multiforme. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
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2013. Molecular Correlates of Morphometric Subtypes in Glioblastoma Multiforme. Computational Systems Biology: From Molecular Mechanisms to Disease: Second Edition. :423–454.
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2011. Morphometic analysis of TCGA glioblastoma multiforme. {BMC} Bioinformatics. 12:484.
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2009. Morphometric Subtyping for a Panel of Breast Cancer Cell Lines. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.