Publication

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Chang H, Auer M, Parvin B.  2009.  Structural Annotation of EM Images by Graph Cut. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.
Chang H, Zhou Y, Borowsky A, Barner KE, Spellman PT, Parvin B.  2015.  Stacked Predictive Sparse Decomposition for Classification of Histology Sections. International Journal of Computer Vision. 113:3–18.
Chang H, Zhou Y, Spellman PT, Parvin B.  2013.  Stacked Predictive Sparse Coding for Classification of Distinct Regions in Tumor Histopathology. {IEEE} International Conference on Computer Vision, {ICCV} 2013, Sydney, Australia, December 1-8, 2013.
Chang H, Parvin B.  2006.  Segmentation of Three Dimensional Cell Culture Models from a Single Focal Plane. Advances in Visual Computing, Second International Symposium, {ISVC} 2006 Lake Tahoe, NV, USA, November 6-8, 2006. Proceedings, Part {II}.
Han J, Chang H, Yang Q, Barcellos-Hoff MHelen, Parvin B.  2007.  Segmentation of Mammosphere Structures from Volumetric Data. Proceedings of the 2007 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.
Chang H, Yang Q, Parvin B.  2007.  Segmentation of heterogeneous blob objects through voting and level set formulation. Pattern Recognition Letters. 28:1781–1787.
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Chang H, Park C, Parvin B.  2007.  Quantitative Representation of Three-dimensional Cell Culture Models. Proceedings of the 2007 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.
Groesser T, Fontenay GV, Han J, Chang H, Pluth J, Parvin B.  2015.  Quantification of the Dynamics of DNA Repair to Ionizing Radiation via Colocalization of 53BP1 and γH2AX. Video Bioinformatics: From Live Imaging to Knowledge.
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Chang H, Spellman PT, Parvin B.  2015.  Predictive sparse morphometric context for classification of histology sections. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
Chang H, Andarawewa KL, Han J, Barcellos-Hoff MHelen, Parvin B.  2007.  Perceptual Grouping of Membrane Signals in Cell-Based Assays. Proceedings of the 2007 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.
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Zhou Y, Chang H, Barner KE, Parvin B.  2015.  Nuclei segmentation via sparsity constrained convolutional regression. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
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Chang H, Han J, Spellman PT, Parvin B.  2012.  Multireference Level Set for the Characterization of Nuclear Morphology in Glioblastoma Multiforme. {IEEE} Trans. Biomed. Engineering. 59:3460–3467.
Chang H, Parvin B.  2010.  Multiphase level set for automated delineation of membrane-bound macromolecules. Proceedings of the 2010 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April, 2010.
Han J, Chang H, Fontenay G, Wang NJ, Gray JW, Parvin B.  2009.  Morphometric Subtyping for a Panel of Breast Cancer Cell Lines. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.
Chang H, Fontenay G, Han J, Cong G, Baehner FL, Gray JW, Spellman PT, Parvin B.  2011.  Morphometic analysis of TCGA glioblastoma multiforme. {BMC} Bioinformatics. 12:484.
Chang H, Fontenay G, Bilgin CCagatay, Borowsky A, Spellman P, Parvin B.  2013.  Molecular Correlates of Morphometric Subtypes in Glioblastoma Multiforme. Computational Systems Biology: From Molecular Mechanisms to Disease: Second Edition. :423–454.
Han J, Chang H, Fontenay G, Spellman PT, Borowsky A, Parvin B.  2012.  Molecular bases of morphometric composition in Glioblastoma multiforme. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
Chang H, Yang Q, Auer M, Parvin B.  2007.  Modeling of Front Evolution with Graph Cut Optimization. Proceedings of the International Conference on Image Processing, {ICIP} 2007, September 16-19, 2007, San Antonio, Texas, {USA}.
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Le QV, Han J, Gray JW, Spellman PT, Borowsky A, Parvin B.  2012.  Learning invariant features of tumor signature with independent subspace analysis. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.

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