Publication

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Author Title Type [ Year(Asc)]
Filters: Author is Bahram Parvin  [Clear All Filters]
2016
Han J, Wang Y, Cai W, Borowsky A, Parvin B, Chang H.  2016.  Integrative Analysis of Cellular Morphometric Context Reveals Clinically Relevant Signatures in Lower Grade Glioma. Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2016 - 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part {I}.
2015
Chang H, Wen Q, Parvin B.  2015.  Coupled segmentation of nuclear and membrane-bound macromolecules through voting and multiphase level set. Pattern Recognition. 48:882–893.
Parvin B, Chang H, Han J, Fontenay G.  2015.  Diagnostic and prognostic histopathology system using morphometric indices.
Zhou Y, Chang H, Barner KE, Parvin B.  2015.  Nuclei segmentation via sparsity constrained convolutional regression. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
Chang H, Spellman PT, Parvin B.  2015.  Predictive sparse morphometric context for classification of histology sections. 12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015.
Groesser T, Fontenay GV, Han J, Chang H, Pluth J, Parvin B.  2015.  Quantification of the Dynamics of DNA Repair to Ionizing Radiation via Colocalization of 53BP1 and γH2AX. Video Bioinformatics: From Live Imaging to Knowledge.
Chang H, Zhou Y, Borowsky A, Barner KE, Spellman PT, Parvin B.  2015.  Stacked Predictive Sparse Decomposition for Classification of Histology Sections. International Journal of Computer Vision. 113:3–18.
2014
Zhou Y, Chang H, Barner KE, Spellman PT, Parvin B.  2014.  Classification of Histology Sections via Multispectral Convolutional Sparse Coding. 2014 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2014, Columbus, OH, USA, June 23-28, 2014.
2013
Chang H, Nayak N, Spellman PT, Parvin B.  2013.  Characterization of Tissue Histopathology via Predictive Sparse Decomposition and Spatial Pyramid Matching. Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part {II}.
Chang H, Borowsky A, Spellman PT, Parvin B.  2013.  Classification of Tumor Histology via Morphometric Context. 2013 {IEEE} Conference on Computer Vision and Pattern Recognition, Portland, OR, USA, June 23-28, 2013.
Nayak N, Chang H, Borowsky A, Spellman PT, Parvin B.  2013.  Classification of tumor histopathology via sparse feature learning. {ISBI}.
Bilgin CCagatay, Kim S, Leung E, Chang H, Parvin B.  2013.  Integrated profiling of three dimensional cell culture models and 3D microscopy. Bioinformatics. 29:3087–3093.
Chang H, Han J, Borowsky A, Loss LA, Gray JW, Spellman PT, Parvin B.  2013.  Invariant Delineation of Nuclear Architecture in Glioblastoma Multiforme for Clinical and Molecular Association. {IEEE} Trans. Med. Imaging. 32:670–682.
Chang H, Fontenay G, Bilgin CCagatay, Borowsky A, Spellman P, Parvin B.  2013.  Molecular Correlates of Morphometric Subtypes in Glioblastoma Multiforme. Computational Systems Biology: From Molecular Mechanisms to Disease: Second Edition. :423–454.
Chang H, Zhou Y, Spellman PT, Parvin B.  2013.  Stacked Predictive Sparse Coding for Classification of Distinct Regions in Tumor Histopathology. {IEEE} International Conference on Computer Vision, {ICCV} 2013, Sydney, Australia, December 1-8, 2013.
2012
Loss LA, Bebis G, Chang H, Auer M, Sarkar P, Parvin B.  2012.  Automatic segmentation and quantification of filamentous structures in electron tomography. {ACM} International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB’ 12, Orlando, FL, {USA} - October 08 - 10, 2012.
Chang H, Loss LA, Spellman PT, Borowsky A, Parvin B.  2012.  Batch-invariant nuclear segmentation in whole mount histology sections. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
Loss LA, Chang H, Sarkar P, Auer M, Parvin B.  2012.  Detection of 3D filamentous networks from tomographic electron microscopy. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
Le QV, Han J, Gray JW, Spellman PT, Borowsky A, Parvin B.  2012.  Learning invariant features of tumor signature with independent subspace analysis. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
Han J, Chang H, Fontenay G, Spellman PT, Borowsky A, Parvin B.  2012.  Molecular bases of morphometric composition in Glioblastoma multiforme. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.
Chang H, Han J, Spellman PT, Parvin B.  2012.  Multireference Level Set for the Characterization of Nuclear Morphology in Glioblastoma Multiforme. {IEEE} Trans. Biomed. Engineering. 59:3460–3467.
2011
Han J, Chang H, Loss LA, Zhang K, Baehner FL, Gray JW, Spellman PT, Parvin B.  2011.  Comparison of sparse coding and kernel methods for histopathological classification of gliobastoma multiforme. Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}.
Chang H, Fontenay G, Han J, Cong G, Baehner FL, Gray JW, Spellman PT, Parvin B.  2011.  Morphometic analysis of TCGA glioblastoma multiforme. {BMC} Bioinformatics. 12:484.
2010
Chang H, Parvin B.  2010.  Multiphase level set for automated delineation of membrane-bound macromolecules. Proceedings of the 2010 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April, 2010.
2009
Wen Q, Chang H, Parvin B.  2009.  A Delaunay Triangulation Approach for Segmenting Clumps of Nuclei. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.

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