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Han J, Chang H, Yang Q, Barcellos-Hoff MHelen, Parvin B. 2006. 3D Segmentation of Mammospheres for Localization Studies. Advances in Visual Computing, Second International Symposium, {ISVC} 2006, Lake Tahoe, NV, USA, November 6-8, 2006 Proceedings, Part {I}.

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Loss LA, Bebis G, Chang H, Auer M, Sarkar P, Parvin B. 2012. Automatic segmentation and quantification of filamentous structures in electron tomography. {ACM} International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB’ 12, Orlando, FL, {USA} - October 08 - 10, 2012.

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Chang H, Loss LA, Spellman PT, Borowsky A, Parvin B. 2012. Batch-invariant nuclear segmentation in whole mount histology sections. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.

Chang H, Yang Q, Parvin B. 2008. A Bayesian approach for image segmentation with shape priors. 2008 {IEEE} Computer Society Conference on Computer Vision and Pattern Recognition {(CVPR} 2008), 24-26 June 2008, Anchorage, Alaska, {USA}.

Bilgin CCagatay, Fontenay G, Cheng Q, Chang H, Han J, Parvin B. 2016. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models. PLoS One. 11:e0148379.

Dumont N, Liu B, DeFilippis RAnna, Chang H, Rabban JT, Karnezis AN, Tjoe JA, Marx J, Parvin B, Tlsty TD. 2013. Breast fibroblasts modulate early dissemination, tumorigenesis, and metastasis through alteration of extracellular matrix characteristics. Neoplasia. 15:249-62.

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DeFilippis RAnna, Chang H, Dumont N, Rabban JT, Chen Y-Y, Fontenay GV, Berman HK, Gauthier ML, Zhao J, Hu D et al.. 2012. CD36 repression activates a multicellular stromal program shared by high mammographic density and tumor tissues. Cancer Discov. 2:826-39.

Chang H, Nayak N, Spellman PT, Parvin B. 2013. Characterization of Tissue Histopathology via Predictive Sparse Decomposition and Spatial Pyramid Matching. Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part {II}.

Zhou Y, Chang H, Barner KE, Spellman PT, Parvin B. 2014. Classification of Histology Sections via Multispectral Convolutional Sparse Coding. 2014 {IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR} 2014, Columbus, OH, USA, June 23-28, 2014.

Chang H, Borowsky A, Spellman PT, Parvin B. 2013. Classification of Tumor Histology via Morphometric Context. 2013 {IEEE} Conference on Computer Vision and Pattern Recognition, Portland, OR, USA, June 23-28, 2013.

Nayak N, Chang H, Borowsky A, Spellman PT, Parvin B. 2013. Classification of tumor histopathology via sparse feature learning. {ISBI}.

Han J, Chang H, Loss LA, Zhang K, Baehner FL, Gray JW, Spellman PT, Parvin B. 2011. Comparison of sparse coding and kernel methods for histopathological classification of gliobastoma multiforme. Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}.

Chang H, Wen Q, Parvin B. 2015. Coupled segmentation of nuclear and membrane-bound macromolecules through voting and multiphase level set. Pattern Recognition. 48:882–893.

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Wen Q, Chang H, Parvin B. 2009. A Delaunay Triangulation Approach for Segmenting Clumps of Nuclei. Proceedings of the 2009 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.

Loss LA, Chang H, Sarkar P, Auer M, Parvin B. 2012. Detection of 3D filamentous networks from tomographic electron microscopy. 9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.

Parvin B, Chang H, Han J, Fontenay G. 2015. Diagnostic and prognostic histopathology system using morphometric indices.

Yang H, Zhang M, Mao X-Y, Chang H, Perez-Losada J, Mao J-H. 2021. Distinct Clinical Impact and Biological Function of Angiopoietin and Angiopoietin-like Proteins in Human Breast Cancer.. Cells. 10(10)

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Chang H, Yang X, Moore J, Liu X-P, Jen K-Y, Snijders AM, Ma L, Chou W, Corchado-Cobos R, García-Sancha N et al.. 2021. From Mouse to Human: Cellular Morphometric Subtype Learned From Mouse Mammary Tumors Provides Prognostic Value in Human Breast Cancer.. Front Oncol. 11:819565.

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Mao J-H, Kim Y-M, Zhou Y-X, Hu D, Zhong C, Chang H, Brislawn CJ, Fansler S, Langley S, Wang Y et al.. 2020. Genetic and metabolic links between the murine microbiome and memory.. Microbiome. 8(1):53.

Chang H, DeFilippis RAnna, Tlsty TD, Parvin B. 2009. Graphical methods for quantifying macromolecules through bright field imaging. Bioinformatics. 25:1070–1075.

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Vatter FAPelissie, Schapiro D, Chang H, Borowsky AD, Lee JK, Parvin B, Stampfer MR, LaBarge MA, Bodenmiller B, Lorens JB. 2018. High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia.. Cell Rep. 23(4):1205-1219.

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Mao AW, Barck H, Young J, Paley A, Mao J-H, Chang H. 2022. Identification of a novel cancer microbiome signature for predicting prognosis of human breast cancer patients.. Clin Transl Oncol. 24(3):597-604.

Nath S, Spencer VA, Han J, Chang H, Zhang K, Fontenay GV, Anderson C, Hyman JM, Nilsen-Hamilton M, Chang Y-T et al.. 2012. Identification of fluorescent compounds with non-specific binding property via high throughput live cell microscopy. PLoS One. 7:e28802.

Han J, Chang H, Andarawewa KL, Yaswen P, Barcellos-Hoff MHelen, Parvin B. 2008. Integrated profiling of cell surface protein and nuclear marker for discriminant analysis. Proceedings of the 2008 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, May 14-17, 2008.

Bilgin CCagatay, Kim S, Leung E, Chang H, Parvin B. 2013. Integrated profiling of three dimensional cell culture models and 3D microscopy. Bioinformatics. 29:3087–3093.

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